RNA Viruses: Host Gene Responses to Infections

722 Pages·2009·41.11 MB·English

by  Decheng Yang

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edited by
Decheng Yang
University of British Columbia, Canada
World Scientific
NEW JERSEY • LONDON • SINGAPORE • BEIJING • SHANGHAI • HONG KONG • TAIPEI • CHENNAI
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Published by
World Scientific Publishing Co. Pte. Ltd.
5 Toh Tuck Link, Singapore 596224
USA office: 27 Warren Street, Suite 401-402, Hackensack, NJ 07601
UK office: 57 Shelton Street, Covent Garden, London WC2H 9HE
Library of Congress Cataloging-in-Publication Data
RNA viruses : host gene responses to infections / editor, Decheng Yang.
p. ; cm.
Includes bibliographical references and index.
ISBN-13: 978-981-283-379-2 (hardcover)
ISBN-10: 981-283-379-X (hardcover)
1. RNA viruses. 2. Viral genetics. I.Yang, Decheng.
[DNLM: 1. Host-Pathogen Interactions. 2. RNA Viruses--physiology. 3. Gene Expression
Regulation, Viral. 4. RNA Interference. 5. RNA Viruses--genetics. QW 168 R6268 2009]
QR395.R584 2009
579.2'5--dc22
2008035064
British Library Cataloguing-in-Publication Data
A catalogue record for this book is available from the British Library.
Copyright © 2009 by World Scientific Publishing Co. Pte. Ltd.
All rights reserved. This book, or parts thereof, may not be reproduced in any form or by any means,
electronic or mechanical, including photocopying, recording or any information storage and retrieval
system now known or to be invented, without written permission from the Publisher.
For photocopying of material in this volume, please pay a copying fee through the Copyright
Clearance Center, Inc., 222 Rosewood Drive, Danvers, MA 01923, USA. In this case permission to
photocopy is not required from the publisher.
Typeset by Stallion Press
Email: [email protected]
Printed in Singapore.
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Contents
Contributors ix
Preface xxiii
Section I Retrovirus 1
1 Efforts to Characterize Host Response to HIV-1 Infection 3
Monty Montano& Paola Sebastiani
2 Signaling Pathways Activated by HIVand Their Impact 31
on Immune Responses
Katrina Gee, Sasmita Mishra, Wei Ma,
Marko Kryworuchko & Ashok Kumar
3 Host Immune Responses in HIVInfection 59
Robert D. Allison & Shyam Kottilil
4 HIV-1 and RNAInterference — Examining a Complex 83
System
Zachary A. Klase, Kuan-Teh Jeang & Fatah Kashanchi
Section II Negative Single-Stranded RNAVirus 107
5 Signaling Pathways Induced by Influenza Viruses 109
Stephan Pleschka, Stephan Ludwig,
Oliver Planz & Thorsten Wolff
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vi Contents
6 Host Immune Response to Influenza Virus 131
Thomas M. Moran & Carolina B. López
7 Signaling Pathways in the Host Cell Response 157
to RSVInfection
Allan R. Brasier, Ping Liu, Bing Tian &
Sanjeev Choudhary
8 Protective and Pathologic Host Responses to Pulmonary 185
Respiratory Syncytial Virus Infection
Dennis M. Lindell & Nicholas W. Lukacs
9 Innate Recognition of Viral Infection and the Involvement 209
of Autophagy
Balaji Ramanathan & Akiko Iwasaki
10 VSVInfection Elicits Distinct Host Responses 229
in the Periphery and the Brain
Carol Shoshkes Reiss
11 Hantavirus Infection and Innate Immunity 247
Nandini Sen, Adrish Sen, Peter Alff, Irina Gavrilovskaya &
Erich R. Mackow
12 Measles Virus Captures Specific Host Machineries to Cause 269
Immunosuppression and Disease
Bumsuk Hahm & Michael B. A. Oldstone
Section III Positive Single-Stranded RNAVirus 293
13 Severe Acute Respiratory Syndrome Coronavirus 295
Induces Differential Host Gene Expression Responses
Associated with Pathogenesis
Vincent T. K. Chow & W. F. Leong
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Contents vii
14 Characterization of Signaling Pathways in Cells Infected 321
with SARS-CoV
Tetsuya Mizutani
15 Impact of Filovirus Infection upon Cellular Signaling 345
Pathways
Christopher F. Basler
16 Responses to Ebola and Marburg Virus Infections 371
Thomas W. Geisbert, Friederike Feldmann,
Joan Geisbert & Heinz Feldmann
17 Host Gene Expression Triggered by West Nile Virus 391
Infection
Janusz T. Paweska
18 West Nile Virus-host Interaction: An Immunological 415
Prospective
Raghavan Bhuvanakantham & Mah-Lee Ng
19 Hepatitis C Virus (Flaviviridae): Host Immune Responses 445
to Hepatitis C Virus
Christoph Neumann-Haefelin & Robert Thimme
20 Host responses to Hepatitis C Virus Infection: Gene 471
Expression Profiles and Viral Pathogenesis
Melanie Lambotin, Françoise Stoll-Keller &
Thomas F. Baumert
21 Differential Gene Expression in Coxsackievirus Infection 495
and Its Effect on Viral Pathogenesis
Huifang M. Zhang, Travis Lim, Honglin Luo,
Bruce McManus & Decheng Yang
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viii Contents
22 Host Signaling Responses to Coxsackievirus 525
Infection
Guang Gao, Decheng Yang, Bruce M. McManus &
Honglin Luo
23 Endothelial Damage Response by Dengue Virus Infection 547
Irene Bosch, Katherine J. Martin,
Aniuska Becerra Artiles & Rajas V. Warke
24 Molecular Pathogenesis of Human Norovirus 575
Ming Tan, Tibor Farkas & Xi Jiang
25 Host Responses During Sindbis Virus Encephalomyelitis 601
in Mice: New Implications for Understanding the
Pathogenesis of Alphavirus Infections of the Central
Nervous System
David N. Irani & Natalie A. Prow
Section IV Double-Stranded RNAVirus 625
26 Host Signaling Responses to Reovirus Infection 627
Da Pan, Paola Marcato, Maya Shmulevitz &
Patrick W. Lee
27 Rotavirus Antagonism of the Host Innate Immune Response 655
John T. Patton & Mario Barro
Index 679
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Contributors
PeterAlff
Molecular and Cellular Biology Graduate Program
Department of Medicine, Stony Brook University,
Stony Brook
N.Y. 11794 USA
Robert D. Allison
Infectious Diseases and Immunogenetics Section
Department of Transfusion Medicine
Clinical Center, NIH
Building 10, Room 1C711, 900 Rockville Pike
Bethesda, MD 20892 USA
Aniuska Becerra Artiles
University of Massachusetts Medical School
Center for Infectious Disease and Vaccine Research
55 Lake Ave. North, Worcester
MA01655 USA
Mario Barro
Global Vaccines, Inc.
7020 Kit Creek Road,
Research Triangle Park,
NC, 27709-4827 USA
ChristopherF. Basler
Department of Microbiology
Box 1124, Mount Sinai School of Medicine
1 Gustave L. Levy Place
New York, NY10029 USA
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