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Phylogenetic Inference of Character Evolution I: Discretely Coded Traits Rich Glor University of Kansas March 11, 2014 Research Interests • Herpetology • Adaptive radiation • Species diversiﬁcation • Speciation Outline 1. Insights from studies of character evolution 2. Requirements for studies of character evolution 3. Data exploration • Visualizing trait data on phylogenetic trees (R tutorial) 4. Trait evolution • ML and Bayesian methods for estimating ancestral states, rates, and models of evolution (R & BayesTraits tutorials) • Stochastic character mapping (R & SIMMAP tutorials) • Correlations among characters (BayesTraits tutorial) Outline 1. Insights from studies of character evolution 2. Requirements for studies of character evolution 3. Data exploration • Visualizing trait data on phylogenetic trees (R tutorial) Lunch 4. Trait evolution • ML and Bayesian methods for estimating ancestral states, rates, and models of evolution (R & BayesTraits tutorials) • Stochastic character mapping (R & SIMMAP tutorials) Coffee • Correlations among characters (BayesTraits tutorial) Character evolution road map Discrete Continuous Trait evolution: ancestral Mahler: Wednesday reconstruction, patterns of trait, Glor: Tuesday Wainwright: Thursday rates of trait evolution, Landis: Tuesday Price: Thursday biogeographic analyses Trait interactions: trait Mahler: Wednesday Glor: Tuesday correlations, impact of traits on Wainwright: Thursday Price: Thursday one another Price: Thursday Impact of traits on taxonomic Moore: Thursday diversiﬁcation Insight From Studies of Character Evolution • Trait evolution • Reconstruction of ancestral traits • Proteins Insight From Studies of Character Evolution • Trait evolution • Reconstruction of ancestral traits • Proteins Chang et al. 2002. MBE. Insight From Studies of Character Evolution • Trait evolution • Reconstruction of ancestral traits • Proteins Chang et al. 2002. MBE. Insight From Studies of Character Evolution • Trait evolution • Reconstruction of ancestral traits • Proteins Yang et al. 1995. Genetics Insight From Studies of Character Evolution • Trait evolution • Reconstruction of ancestral traits • Proteins Yang et al. 1995. Genetics

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ML and Bayesian methods for estimating ancestral states, rates, and models of evolution (R Reconstruction of ancestral traits. • Proteins.

Phylogenetic Inference of Character Evolution I PDF

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ML and Bayesian methods for estimating ancestral states, rates, and models of evolution (R Reconstruction of ancestral traits. • Proteins.

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Author:	Unknown
Publication Year:	2014
Pages:	122
Language:	English
File Size:	19.26
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