Table Of ContentLecture Notes in Computer Science 3019
CommencedPublicationin1973
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GerhardGoos,JurisHartmanis,andJanvanLeeuwen
EditorialBoard:
TakeoKanade
CarnegieMellonUniversity,Pittsburgh,PA,USA
JosefKittler
UniversityofSurrey,Guildford,UK
JonM.Kleinberg
CornellUniversity,Ithaca,NY,USA
FriedemannMattern
ETHZurich,Switzerland
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StanfordUniversity,CA,USA
OscarNierstrasz
UniversityofBern,Switzerland
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IndianInstituteofTechnology,Madras,India
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DortmundUniversity,Germany
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NewYorkUniversity,NY,USA
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Roman Wyrzykowski Jack Dongarra
Marcin Paprzycki Jerzy Was´niewski (Eds.)
Parallel Processing
and Applied Mathematics
5th International Conference, PPAM 2003
Cze¸stochowa, Poland, September 7-10, 2003
Revised Papers
1 3
VolumeEditors
RomanWyrzykowski
TechnicalUniversityofCze¸stochowa
InstituteofMathematicsandComputerScience
Dabrowskiego73,42-200Cze¸stochowa,Poland
E-mail:[email protected]
JackDongarra
UniversityofTennessee,ComputerScienceDepartment
1122VolunteerBlvd,Knoxville,TN37996-3450,USA
E-mail:[email protected]
MarcinPaprzycki
OklahomaStateUniversity,ComputerScienceDepartment
Tulsa,OK74106,USA
E-mail:[email protected]
JerzyWas´niewski
TechnicalUniversityofDenmark,DepartmentofMathematicalModeling
RichardPetersensPlads,Building321,2800KongensLyngby,Denmark
E-mail:[email protected]
LibraryofCongressControlNumber:2004104391
CRSubjectClassification(1998):D,F.2,G,B.2-3,C.2,J.2
ISSN0302-9743
ISBN3-540-21946-3Springer-VerlagBerlinHeidelbergNewYork
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Preface
It is our pleasure to provide you with the volume containing the proceedings of
the 5th International Conference on Parallel Processing and Applied Mathema-
tics, which was held in Cze¸stochowa, a Polish city famous for its Jasna Gora
Monastery, on September 7–10, 2003. The first PPAM conference was held in
1994 and was organized by the Institute of Mathematics and Computer Science
of the Cz¸estochowa University of Technology in its hometown. The main idea
behind the event was to provide a forum for researchers involved in applied
and computational mathematics and parallel computing to exchange ideas in a
relaxed atmosphere. Conference organizers hoped that this arrangement would
result in cross-pollination and lead to successful research collaborations. In ad-
dition, they hoped that the initially mostly Polish conference would grow into
aninternationalevent.Thefactthattheseassumptionswerecorrectwasproven
by the growth of the event. While the first conference consisted of 41 presenta-
tions, the conference reached 150 participants in Nal(cid:2)e¸cz´ow in 2001. In this way
the PPAM conference has become one of the premiere Polish conferences, and
definitely the most important one in the area of parallel/distributed computing
and applied mathematics.
This year’s meeting gathered almost 200 participants from 32 countries. A
strict refereeing process resulted in the acceptance of approximately 150 contri-
buted presentations, while the rejection rate was approximately 33%. Regular
tracks of the conference covered such important fields of parallel/distributed
computing and applied mathematics as
– parallel and distributed architectures
– scheduling and load balancing
– performance analysis and prediction
– parallel and distributed non-numerical algorithms
– parallel and distributed programming
– tools and environments for parallel and distributed processing
– numerical and non-numerical applications of parallel and distributed com-
puting
– evolutionary and soft computing
– data and knowledge management
– mathematicalandcomputermethodsinmechanicsandmaterialprocessing,
biology and medicine, physics and chemistry, environmental modeling and
seismology, and financial engineering
The plenary and invited talks were presented by S.B. Baden, C. Kessel-
man,B.Chapman,J.Dongarra,S.Gorlatch,J.Kaufman,M.Livny,T.Stricker,
V. Sunderam, B.K. Szyman´ski, D. Trystram, J. We¸glarz, and Z. Zlatev.
Important and integral parts of the PPAM 2003 conference were the work-
shops and special sessions:
VI Preface
– Application Grid Workshop – AGW 2003
– International Workshop on Algorithms, Models and Tools for Parallel Com-
puting on Heterogeneous Networks – HeteroPar 2003
– Workshop on High Perfomance Numerical Algorithms
– Workshop on Large Scale Scientific Computations
– Special Session on Parallel and Distributed Bioinformatic Applications
Finally, the meeting began with two half-day tutorials
– Globus Toolkit version 3, by Ewa Deelman
– Load distribution strategies for HPC applications on clusters of symmetric
multiprocessors, by Peter Luksch
that proved to be very successful, attracting a large number of participants.
We would like to express our gratitude to our sponsors: Intel Corp., IBM
Corp., Optimus S.A., Solidex S.A. We would also like to say thank you to all
membersoftheInternationalProgramCommitteewhoworkeddiligentlyrefere-
eing the submissions. Finally, we would like to thank all of the local organizers,
including the Ph.D. students from the Cze¸stochowa University of Technology,
who helped us run the event very smoothly.
We hope that this volume will be useful to you. We would also like everyone
who reads it to feel invited to the next conference, which will take place in Po-
land in 2005.
Roman Wyrzykowski
January 2004 Jack Dongarra
Marcin Paprzycki
Jerzy Wa´sniewski
Table of Contents
Parallel and Distributed Architectures
Session Guarantees to Achieve PRAM Consistency
of Replicated Shared Objects ....................................... 1
Jerzy Brzezinski, Cezary Sobaniec, Dariusz Wawrzyniak
An Extended Atomic Consistency Protocol
for Recoverable DSM Systems ...................................... 9
Jerzy Brzezinski, Michal Szychowiak
Hyper-Threading Technology Speeds Clusters......................... 17
Kazimierz Wackowski, Pawel Gepner
Building Autonomic Clusters: A Response to IBM’s Autonomic
Computing Challenge ............................................. 27
Andrzej Goscinski, Jackie Silcock, Michael Hobbs
Configurable Microprocessor Array for DSP Applications .............. 36
Oleg Maslennikow, Juri Shevtshenko, Anatoli Sergyienko
On Generalized Moore Digraphs .................................... 42
Michael Sampels
RDMA Communication Based on Rotating Buffers
for Efficient Parallel Fine-Grain Computations ....................... 50
Adam Smyk, Marek Tudruj
Communication on the Fly in Dynamic SMP Clusters –
Towards Efficient Fine Grain Numerical Computations................. 59
Marek Tudruj, Lukasz Masko
Wait-Free Publish/Subscribe Using Atomic Registers .................. 69
Pradeep Varma
Scheduling and Load Balancing
Accelerated Diffusion Algorithms on General Dynamic Networks ........ 77
Jacques Bahi, Rapha¨el Couturier, Flavien Vernier
Suitability of Load Scheduling Algorithms
to Workload Characteristics ........................................ 83
Eunmi Choi, Dugki Min
VIII Table of Contents
Minimizing Time-Dependent Total Completion Time
on Parallel Identical Machines ...................................... 89
Stanis(cid:2)law Gawiejnowicz, Wiesl(cid:2)aw Kurc, Lidia Pankowska
Diffusion Based Scheduling in the Agent-Oriented Computing System ... 97
Marek Grochowski, Robert Schaefer, Piotr Uhruski
Approximation Algorithms for Scheduling Jobs
with Chain Precedence Constraints.................................. 105
Klaus Jansen, Roberto Solis-Oba
Combining Vector Quantization and Ant-Colony Algorithm
for Mesh-Partitioning.............................................. 113
Jurij Sˇilc, Peter Koroˇsec, Borut Robiˇc
Wavelet-Neuronal Resource Load Prediction
for Multiprocessor Environment..................................... 119
Pawe(cid:2)l Hajto, Marcin Skrzypek
Fault-Tolerant Scheduling in Distributed Real-Time Systems ........... 125
Nguyen Duc Thai
Online Scheduling of Multiprocessor Jobs
with Idle Regulation............................................... 131
Andrei Tchernykh, Denis Trystram
Performance Analysis and Prediction
Predicting the Response Time of a New Task on a Beowulf Cluster...... 145
Marta Beltra´n, Jose L. Bosque
Space Decomposition Solvers and Their Performance
in PC-Based Parallel Computing Environments ....................... 153
Radim Blaheta, Ondˇrej Jakl, Jiˇr´ı Star´y
Evaluation of Execution Time of Mathematical Library Functions
Based on Historical Performance Information......................... 161
Maciej Brzezniak, Norbert Meyer
Empirical Modelling of Parallel Linear Algebra Routines ............... 169
Javier Cuenca, Luis-Pedro Garc´ıa, Domingo Gim´enez, Jos´e Gonza´lez,
Antonio Vidal
Efficiency of Divisible Load Processing............................... 175
Maciej Drozdowski, L(cid:2) ukasz Wielebski
Gray Box Based Data Access Time Estimation for Tertiary Storage
in Grid Environment .............................................. 181
Darin Nikolow, Renata S(cid:2)lota, Jacek Kitowski
Table of Contents IX
Performance Modeling of Parallel FEM Computations on Clusters ...... 189
Tomasz Olas, Roman Wyrzykowski, Adam Tomas,
Konrad Karczewski
Asymptotical Behaviour of the Communication Complexity
of One Parallel Algorithm.......................................... 201
Pavol Purcz
Analytical Modeling of Optimized Sparse Linear Code ................ 207
Pavel Tvrd´ık, Ivan Sˇimeˇcek
Parallel and Distributed Non-numerical Algorithms
A BSP Parallel Model for the Go¨ttfert Algorithm over F .............. 217
2
Fatima Abu Salem
Parallelizing the Unsupervised k-Windows Clustering Algorithm ........ 225
Panagiotis D. Alevizos, Dimitris K. Tasoulis, Michael N. Vrahatis
Parallel Simulated Annealing for Bicriterion Optimization Problems..... 233
Piotr Czarnas, Zbigniew J. Czech, Przemyslaw Gocyl(cid:2)a
Data Decomposition for Parallel K-means Clustering .................. 241
Attila Gursoy
On Generation of Permutations through Suffix/Prefix Reversing
in a Cellular Network.............................................. 249
Zbigniew Kokosin´ski
A Parallel Dynamic Programming Algorithm
for Unranking t–ary Trees.......................................... 255
Zbigniew Kokosin´ski
Adaptive Pareto Differential Evolution and Its Parallelization........... 261
Daniela Zaharie, Dana Petcu
Parallel and Distributed Programming
Global Predicates for Online Control of Distributed Applications........ 269
Janusz Borkowski
A Thread Partitioning Algorithm for Data Locality Improvement ....... 278
Alexander Chernov, Andrey Belevantsev, Oleg Malikov
Parallel Branch-and-Bound Skeletons: Message Passing
and Shared Memory Implementations ............................... 286
Isabel Dorta, Coromoto Leon, Casiano Rodriguez
