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METHODS IN ENZYMOLOGY Editors-in-Chief JOHN N. ABELSON MELVIN I. SIMON AND Division of Biology California Institute of Technology Pasadena, California, USA Founding Editors SIDNEY P. COLOWICK NATHAN O. KAPLAN AND AcademicPressisanimprintofElsevier 525BStreet,Suite1900,SanDiego,CA92101-4495,USA 30CorporateDrive,Suite400,Burlington,MA01803,USA 32JamestownRoad,LondonNW17BY,UK Firstedition2009 Copyright#2009,ElsevierInc.AllRightsReserved. Nopartofthispublicationmaybereproduced,storedinaretrievalsystemortransmittedinany formorbyanymeanselectronic,mechanical,photocopying,recordingorotherwisewithoutthe priorwrittenpermissionofthepublisher PermissionsmaybesoughtdirectlyfromElsevier’sScience&TechnologyRightsDepartment inOxford,UK:phone(+44)(0)1865843830;fax(+44)(0)1865853333;email:permissions@ elsevier.com.AlternativelyyoucansubmityourrequestonlinebyvisitingtheElsevierwebsiteat http://elsevier.com/locate/permissions,andselectingObtainingpermissiontouseElseviermaterial Notice No responsibility is assumed by the publisher for any injury and/or damage to persons or propertyasamatterofproductsliability,negligenceorotherwise,orfromanyuseoroperation ofanymethods,products,instructionsorideascontainedinthematerialherein.Becauseofrapid advancesinthemedicalsciences,inparticular,independentverificationofdiagnosesanddrug dosagesshouldbemade ForinformationonallAcademicPresspublicationsvisitour websiteatelsevierdirect.com ISBN:978-0-08-087776-1 ISSN:0076-6879 PrintedandboundinUnitedStatesofAmerica 09 10 11 12 10 9 8 7 6 5 4 3 2 1 C ONTRIBUTORS BoominathanAmutha Department of Pharmacology and Physiology, UMDNJ, New Jersey Medical School,Newark,NewJersey,USA MatthewC.Altman TheMedicalResearchCouncilMitochondrialBiologyUnit,Cambridge,United Kingdom NikolaiP.Belevich InstituteofBiotechnology,UniversityofHelsinki,Helsinki,Finland GiancarloA.Biagini Liverpool School of Tropical Medicine, Pembroke Place, Liverpool, United Kingdom EgbertJ.Boekema Department of Biophysical Chemistry, Groningen Biomolecular Sciences and BiotechnologyInstitute,UniversityofGroningen,Groningen,TheNetherlands UlrichBrandt MolecularBioenergeticsGroup,ClusterofExcellenceFrankfurt‘‘Macromolecular Complexes,’’MedicalSchool,JohannWolfgangGoethe-University,Frankfurtam Main,Germany Hans-PeterBraun Institute for Plant Genetics, Faculty of Natural Sciences, Universita¨t Hannover, Hannover,Germany ChristineA.Butler DepartmentofMolecularBiologyandGenetics,BiotechnologyBuilding,Cornell University,Ithaca,NewYork,USA RooseveltV.Campbell Department of Neuroscience and Cell Biology, University of Texas Medical Branch,Galveston,Texas,USA JoeCarroll TheMedicalResearchCouncilMitochondrialBiologyUnit,Cambridge,United Kingdom xv xvi Contributors XiaoweiCen DepartmentofBiochemistryandMolecularBiology,OklahomaStateUniversity, Stillwater,Oklahoma,USA JingChen Department of Pathology, Immunology, and Laboratory Medicine, College of Medicine,TheUniversityofFlorida,Gainesville,Florida,USA HelenaM.Cocheme´ Institute of Healthy Ageing, University College London, London, United Kingdom, and The Medical Research Council Mitochondrial Biology Unit, Cambridge,UnitedKingdom AndrewDancis Department of Medicine, Division of Hematology-Oncology, University of Pennsylvania,Philadelphia,Pennsylvania,USA GrazynaDebska-Vielhaber Department of Neurology, University Magdeburg, Magdeburg, Germany, and DivisionofNeurochemistry,DepartmentofEpileptologyandLife&BrainCenter, UniversityBonn,Bonn,Germany CindyE.J.Dieteren Department of Paediatrics, Nijmegen Centre for Mitochondrial Disorders, and Department of Biochemistry, Nijmegen Centre for Molecular Life Sciences, RadboudUniversityNijmegenMedicalCentre,Nijmegen,TheNetherlands MartinaG.Ding Department of Biochemistry, Dartmouth Medical School, Hanover, New Hampshire,USA JackE.Dixon Departments of Pharmacology, Cellular and Molecular Medicine, and Chemistry and Biochemistry, and The Howard Hughes Medical Institute, University of California,SanDiego,LaJolla,California,USA DerekA.Drechsel DepartmentofPharmaceuticalSciences,UniversityofColorado,Denver,Aurora, Colorado,USA StefanDro¨se MolecularBioenergeticsGroup,ClusterofExcellenceFrankfurt‘‘Macromolecular Complexes,’’MedicalSchool,JohannWolfgangGoethe-University,Frankfurtam Main,Germany BillDurham Department ofChemistryandBiochemistry, UniversityofArkansas,Fayetteville, Arkansas,USA Contributors xvii IanM.Fearnley TheMedicalResearchCouncilMitochondrialBiologyUnit,Cambridge,United Kingdom NicholasFisher Liverpool School of Tropical Medicine, Pembroke Place, Liverpool, United Kingdom ThomasD.Fox DepartmentofMolecularBiologyandGenetics,BiotechnologyBuilding,Cornell University,Ithaca,NewYork,USA TerrenceG.Frey DepartmentofBiology,SanDiegoStateUniversity,SanDiego,California,USA AlexanderGalkin The Wolfson Institute for Biomedical Research, The Cruciform Building, UniversityCollegeLondon,London,UnitedKingdom LoisGeren DepartmentofChemistryandBiochemistry, UniversityofArkansas,Fayetteville, Arkansas,USA Franc¸oisGodard InstitutdeBiochimieetGe´ne´tiqueCellulaires(CNRS),Universite´VictorSegalen, Bordeaux,France DonnaM.Gordon Department of Biological Sciences, Mississippi State University, Mississippi State, Mississippi,USA AaronM.Gusdon Department of Pathology, Immunology, and Laboratory Medicine, College of Medicine,TheUniversityofFlorida,Gainesville,Florida,USA MarkA.Hink MaxPlanckInstituteforMolecularPhysiology,Dortmund,Germany GregoryHolmes-Hampton DepartmentofChemistry,TexasA&MUniversity,CollegeStation,Texas,USA ThomasR.Hurd TheMedicalResearchCouncilMitochondrialBiologyUnit,Cambridge,United Kingdom AndrewM.James TheMedicalResearchCouncilMitochondrialBiologyUnit,Cambridge,United Kingdom xviii Contributors WernerJ.H.Koopman Department of Biochemistry, and Microscopical Imaging Centre, Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Centre,Nijmegen,TheNetherlands RomanKouˇril Department of Biophysical Chemistry, Groningen Biomolecular Sciences and BiotechnologyInstitute,UniversityofGroningen,Groningen,TheNetherlands AlexeiP.Kudin DivisionofNeurochemistry,DepartmentofEpileptologyandLife&BrainCenter, UniversityBonn,Bonn,Germany WolframS.Kunz DivisionofNeurochemistry,DepartmentofEpileptologyandLife&BrainCenter, UniversityBonn,Bonn,Germany MichaelLazarou DepartmentofBiochemistry,LaTrobeUniversity,Melbourne,Australia YanchunLi DepartmentofNeurology,BaylorCollegeofMedicine,Houston,Texas,USA RolandLill Institut fu¨r Zytobiologie and Zytopathologie, Philipps-Universita¨t, Marburg, Germany KathrynS.Lilley Department of Biochemistry, Cambridge System Biology Centre, University of Cambridge,Cambridge,UnitedKingdom PaulA.Lindahl DepartmentofBiochemistryandBiophysics,andDepartmentofChemistry,Texas A&MUniversity,CollegeStation,Texas,USA DominikaMalinska Laboratory of Intracellular Ion Channels, Nencki Institute of Experimental Biology, Warsaw, Poland, and Division of Neurochemistry, Department of EpileptologyandLife&BrainCenter,UniversityBonn,Bonn,Germany DouglasMarshall TheJohnsonResearchFoundationandDepartmentofBiochemistryandBiophysics, UniversityofPennsylvania,Philadelphia,Pennsylvania,USA ClaytonE.Mathews Department of Pathology, Immunology, and Laboratory Medicine, College of Medicine,TheUniversityofFlorida,Gainesville,Florida,USA MatthewMcKenzie DepartmentofBiochemistry,LaTrobeUniversity,Melbourne,Australia Contributors xix RenMiao DepartmentofChemistry,TexasA&MUniversity,CollegeStation,Texas,USA FrancisMillett DepartmentofChemistryandBiochemistry, UniversityofArkansas,Fayetteville, Arkansas,USA JessicaGarberMorales DepartmentofChemistry,TexasA&MUniversity,CollegeStation,Texas,USA MichaelP.Murphy TheMedicalResearchCouncilMitochondrialBiologyUnit,Cambridge,United Kingdom LeoG.J.Nijtmans Department of Paediatrics, Nijmegen Centre for Mitochondrial Disorders, RadboudUniversityNijmegenMedicalCentre,Nijmegen,TheNetherlands EstherNu¨bel Cluster of Excellence ‘‘Macromolecular Complexes,’’ Zentrum der Biologischen Chemie, Molekulare Bioenergetik, Goethe-Universita¨t Frankfurt, Frankfurt, Germany DebkumarPain Department of Pharmacology and Physiology, UMDNJ, New Jersey Medical School,Newark,NewJersey,USA ManishaPatel DepartmentofPharmaceuticalSciences,UniversityofColoradoDenver,Aurora, Colorado,USA GuyA.Perkins National Center for Microscopy and Imaging Research, Center for Research in BiologicalSystems,UniversityofCalifornia,SanDiego,LaJolla,California,USA AparnaRachamallu Department of Neuroscience and Cell Biology, University of Texas Medical Branch,Galveston,Texas,USA MichaelRadermacher University of Vermont, Department of Molecular Physiology and Biophysics, Burlington,Vermont,USA Jean-PauldiRago InstitutdeBiochimieetGe´ne´tiqueCellulaires(CNRS),Universite´VictorSegalen, Bordeaux,France xx Contributors MatthewJ.Rardin GibsonLab,TheBuckInstituteforAgeResearch,Novato,California,USA PeterR.Rich GlynnLaboratoryofBioenergetics,InstituteofStructuralandMolecularBiology, UniversityCollegeLondon,London,UnitedKingdom MichaelT.Ryan DepartmentofBiochemistry,LaTrobeUniversity,Melbourne,Australia ScottA.Saracco DepartmentofMolecularBiologyandGenetics,BiotechnologyBuilding,Cornell University,Ithaca,NewYork,USA HermannScha¨gger Cluster of Excellence ‘‘Macromolecular Complexes,’’ Zentrum der Biologischen Chemie, Molekulare Bioenergetik, Goethe-Universita¨t Frankfurt, Frankfurt, Germany AlexD.Sheftel Institut fu¨r Zytobiologie and Zytopathologie, Philipps-Universita¨t, Marburg, Germany WimSluiter Department of Biochemistry, Mitochondrial Research Unit, Erasmus MC, Dr.Molewaterplein50-60,Rotterdam,TheNetherlands OliverStehling Institut fu¨r Zytobiologie and Zytopathologie, Philipps-Universita¨t, Marburg, Germany RosemaryA.Stuart DepartmentofBiologicalSciences,MarquetteUniversity,Milwaukee,Wisconsin, USA MeiG.Sun DepartmentofBiology,SanDiegoStateUniversity,SanDiego,California,USA StephanieSunderhaus Institute for Plant Genetics, Faculty of Natural Sciences, Universita¨t Hannover, Hannover,Germany HermanG.Swarts Department of Biochemistry, Nijmegen Centre for Molecular Life Sciences, RadboudUniversityNijmegenMedicalCentre,Nijmegen,TheNetherlands BernardL.Trumpower Department of Biochemistry, Dartmouth Medical School, Hanover, New Hampshire,USA Contributors xxi MarinaL.Verkhovskaya InstituteofBiotechnology,UniversityofHelsinki,Helsinki,Finland MichaelI.Verkhovsky InstituteofBiotechnology,UniversityofHelsinki,Helsinki,Finland StefanVielhaber DepartmentofNeurology,UniversityMagdeburg,Magdeburg,Germany TatyanaV.Votyakova Department of Pediatrics, School of Medicine, University of Pittsburgh, Pennsylvania,USA JohnE.Walker TheMedicalResearchCouncilMitochondrialBiologyUnit,Cambridge,United Kingdom TingWang Department of Microbiology and Immunology, University of Texas Medical Branch,Galveston,Texas,USA StephenA.Ward Liverpool School of Tropical Medicine, Pembroke Place, Liverpool, United Kingdom AshleyJ.Warman Liverpool School of Tropical Medicine, Pembroke Place, Liverpool, United Kingdom StanleyJ.Watowich DepartmentofBiochemistryandMolecularBiology,UniversityofTexasMedical Branch,Galveston,Texas,USA StevenA.Weinman Department of Internal Medicine, University of Kansas Medical Center, Kansas City,Kansas,USA SandraE.Wiley Departments of Pharmacology, Cellular and Molecular Medicine, and Chemistry andBiochemistry,UniversityofCalifornia,SanDiego,LaJolla,California,USA PeterH.G.M.Willems Department of Biochemistry and Microscopical Imaging Centre, Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Centre,Nijmegen,TheNetherlands L.Elly.A.deWit Department of Biochemistry, Mitochondrial Research Unit, Erasmus MC, Dr.Molewaterplein50-60,Rotterdam,TheNetherlands

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The first of two new volumes covering mitochondria, this volume examines modern methods that have been developed to examine mitochondrial electron transport chain complexes, iron-sulfur proteins and reactive oxygen species. The critically acclaimed laboratory standard for forty years, Methods in Enz
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The first of two new volumes covering mitochondria, this volume examines modern methods that have been developed to examine mitochondrial electron transport chain complexes, iron-sulfur proteins and reactive oxygen species. The critically acclaimed laboratory standard for forty years, Methods in Enz

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