Biocalorimetry: foundations and contemporary approaches

412 Pages·2016·12.294 MB·English

by  Bastos, Margarida

Biocalorimetry
Foundations and
Contemporary Approaches
TThhiiss ppaaggee iinntteennttiioonnaallllyy lleefftt bbllaannkk
Biocalorimetry
Foundations and
Contemporary Approaches
Edited by
Margarida Bastos
Department of Chemistry & Biochemistry
Faculty of Sciences, University of Porto
Boca Raton London New York
CRC Press is an imprint of the
Taylor & Francis Group, an informa business
CRC Press
Taylor & Francis Group
6000 Broken Sound Parkway NW, Suite 300
Boca Raton, FL 33487-2742
© 2016 by Taylor & Francis Group, LLC
CRC Press is an imprint of Taylor & Francis Group, an Informa business
No claim to original U.S. Government works
Version Date: 20151214
International Standard Book Number-13: 978-1-4822-4666-7 (eBook - PDF)
This book contains information obtained from authentic and highly regarded sources. Reasonable efforts have been
made to publish reliable data and information, but the author and publisher cannot assume responsibility for the valid-
ity of all materials or the consequences of their use. The authors and publishers have attempted to trace the copyright
holders of all material reproduced in this publication and apologize to copyright holders if permission to publish in this
form has not been obtained. If any copyright material has not been acknowledged please write and let us know so we may
rectify in any future reprint.
Except as permitted under U.S. Copyright Law, no part of this book may be reprinted, reproduced, transmitted, or uti-
lized in any form by any electronic, mechanical, or other means, now known or hereafter invented, including photocopy-
ing, microfilming, and recording, or in any information storage or retrieval system, without written permission from the
publishers.
For permission to photocopy or use material electronically from this work, please access www.copyright.com (http://
www.copyright.com/) or contact the Copyright Clearance Center, Inc. (CCC), 222 Rosewood Drive, Danvers, MA 01923,
978-750-8400. CCC is a not-for-profit organization that provides licenses and registration for a variety of users. For
organizations that have been granted a photocopy license by the CCC, a separate system of payment has been arranged.
Trademark Notice: Product or corporate names may be trademarks or registered trademarks, and are used only for
identification and explanation without intent to infringe.
Visit the Taylor & Francis Web site at
http://www.taylorandfrancis.com
and the CRC Press Web site at
http://www.crcpress.com
To my children Rita and Tiago
and my grandson Tomás.
TThhiiss ppaaggee iinntteennttiioonnaallllyy lleefftt bbllaannkk
Contents
Preface, xi
Contributors, xiii
Section i Introduction: Historical and Methodological Context
chapter 1 ◾ Introduction 3
Margarida BaStoS
chapter 2 ◾ From Classical Thermochemistry to Monitoring of Living
Organisms 17
ingeMar WadSö
chapter 3 ◾ A Journey in the Land of Biocalorimetry: A Quest for
Knowledge 41
Lee d. hanSen
chapter 4 ◾ An Odyssey in Calorimetric Development: From Past
to Future 63
Jaak SuurkuuSk, MaLin SuurkuuSk, and peter Vikegard
chapter 5 ◾ Enzyme-Catalyzed Reactions 79
roBert n. goLdBerg
Section ii Membrane Characterization and Partition to Membranes
chapter 6 ◾ Temperature-Induced and Isothermal Phase Transitions of
Pure and Mixed Lipid Bilayer Membranes Studied by DSC
and ITC 103
aLfred BLuMe
vii
viii ◾ Contents
chapter 7 ◾ Thermotropic Properties of Ceramides in Aqueous or Lipidic
Environments 137
aLicia aLonSo and feLix M. goñi
chapter 8 ◾ Peptide–Membrane Interactions Studied by Isothermal
Titration Calorimetry 153
JohanneS kLingLer and Sandro keLLer
chapter 9 ◾ DSC Studies on the Modulation of Membrane Lipid
Polymorphism and Domain Organization by Antimicrobial
Peptides 169
karL Lohner
chapter 10 ◾ Kinetics of the Interaction of Amphiphiles with Lipid
Bilayers Using ITC 191
patrícia a. t. MartinS and Maria João Moreno
Section iii Nucleic Acids and Proteins: Stability and Their
Interactions with Ligands
chapter 11 ◾ Calorimetry of DNA: Energetic Basis of the Double Helix 209
peter L. priVaLoV
chapter 12 ◾ Allostery and Cooperative Interactions in Proteins Assessed
by Isothermal Titration Calorimetry 223
adrian VeLazquez-caMpoy
chapter 13 ◾ Protein Stability in Crowded Environments 247
MichaeL SenSke, SiMon eBBinghauS, and chriStian herrMann
chapter 14 ◾ Isothermal Titration Calorimetry and Fluorescent Thermal
and Pressure Shift Assays in Protein–Ligand Interactions 261
VytautaS petrauSkaS, Lina BaranauSkien˙e, aSta zuBrien˙e, and dauMantaS MatuLiS
chapter 15 ◾ Joining Thermodynamics and Kinetics by kinITC 281
phiLippe duMaS
chapter 16 ◾ Calorimetric Approaches to Studying Complex
Protein Structure–Function–Stability Relationships in
Conformational Diseases: The Case of Cystathionine
β-Synthase 301
angeL L. pey, toMaS MaJtan, and Jan p. krauS
Contents   ◾   ix
Section iV Calorimetry as a Tool in Applied Fields
chapter 17 ◾ A n Account in Calorimetric Research: From Fundamentals
to Pharmaceuticals 323
patrick conneLLy
chapter 18 ◾ C alorimetry for Monitoring Mixed Bacterial Populations
and Biofilms 345
SiMon gaiSford
chapter 19 ◾ I sothermal Microcalorimetry for the Investigation of Clinical
Samples: Past and Present 363
oLiVier BraiSSant, gernot Bonkat, and aLexander BachMann
chapter 20 ◾ C alorimetric Assays for Heterogeneous Enzyme Catalysis:
Hydrolysis of Cellulose and Biomass 381
peter WeSth and kiM Borch
INDEX, 395